This function processes the main assay in the SingleCellExperiment object to be used as the primary data matrix in the AnnData object.
Usage
process_main_assay(sce, assayName)
Arguments
- sce
A SingleCellExperiment object.
- assayName
The name of the assay to use as the main data matrix in AnnData.
Value
The main data matrix (anndata.X) for the AnnData object.